Variant Details

Variant: esv2737545

Internal ID

9971884

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Outer	chr8:125398934..126602079	hg38	UCSC Ensembl
Outer	chr8:126411176..127614324	hg19	UCSC Ensembl

Cytoband

8q24.13

Allele length

Assembly	Allele length
hg38	1203146
hg19	1203149

Variant Type

CNV deletion

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv6866422, essv6684609, essv6823072, essv6705699, essv6976072, essv6958246, essv6970144, essv6737478, essv6861198, essv6893987, essv6919574, essv6681061, essv6811822, essv6808949, essv6731548, essv6727780, essv6694923, essv6900214, essv6672202, essv6964845, essv6912014, essv6923720, essv6890803, essv6765438, essv6958245, essv6923721, essv6830790, essv6709026, essv6904391, essv6701839, essv6814952, essv6755091, essv6964844, essv6966794, essv6876243, essv6787155, essv6757868, essv6887567, essv6760571, essv6879095, essv6799609, essv6791248, essv6884718, essv6778885, essv6766954, essv6720139, essv6734817, essv6912013, essv6948482, essv6791247, essv6904390, essv6782937, essv6939739, essv6740573, essv6683665, essv6801343, essv6760570, essv6884716, essv6881929, essv6683676, essv6720138, essv6684608, essv6811819, essv6935465, essv6737477, essv6705700, essv6827124, essv6827121, essv6775192, essv6766965, essv6771505, essv6734142, essv6691111, essv6919575, essv6723933, essv6931208, essv6712498, essv6830876, essv6915647, essv6900213, essv6707776, essv6850274, essv6830791, essv6834400, essv6841903, essv6856294, essv6778886, essv6740572, essv6734131, essv6894146, essv6803082, essv6801365, essv6819022, essv6805959, essv6927431, essv6672203, essv6944265, essv6691112, essv6677253, essv6948486, essv6934240, essv6923723, essv6935466, essv6861694, essv6667930, essv6775191, essv6677252, essv6861209, essv6723930, essv6934229, essv6870323, essv6694924, essv6850278, essv6890802, essv6686820, essv6667929, essv6763028, essv6765439, essv6976071, essv6705697, essv6845512, essv6687845, essv6897230, essv6861698, essv6884717, essv6801354, essv6787152, essv6763029, essv6873285, essv6908306, essv6819023, essv6939741, essv6803083, essv6743624, essv6701836, essv6787151, essv6778884, essv6976074, essv6791246, essv6876244, essv6827123, essv6887568, essv6683687, essv6808948, essv6952632, essv6931205, essv6935464, essv6805958, essv6795424, essv6814953, essv6919572, essv6830887, essv6687843, essv6958247, essv6712500, essv6691109, essv6856293, essv6838079, essv6782936, essv6870322, essv6850279, essv6799611, essv6850275, essv6716205, essv6893976, essv6775190, essv6734155, essv6791250, essv6746419, essv6881928, essv6768068, essv6870324, essv6752141, essv6948483, essv6887565, essv6861695, essv6944266, essv6723934, essv6927430, essv6931207, essv6904952, essv6915646, essv6900215, essv6766943, essv6944264, essv6734818, essv6701837, essv6694922, essv6778887, essv6923722, essv6834398, essv6879094, essv6866420, essv6861696, essv6791249, essv6850277, essv6749257, essv6681060, essv6814955, essv6701838, essv6845513, essv6698380, essv6850273, essv6827122

Samples

SSM100, SSM059, SSM036, SSM008, SSM083, SSM071, SSM027, SSM024, SSM075, SSM045, SSM046, SSM011, SSM064, SSM079, SSM065, SSM087, SSM038, SSM097, SSM039, SSM013, SSM009, SSM073, SSM093, SSM050, SSM074, SSM042, SSM088, SSM002, SSM041, SSM057, SSM023, SSM058, SSM028, SSM092, SSM084, SSM090, SSM021, SSM047, SSM018, SSM069, SSM061, SSM029, SSM096, SSM062, SSM026, SSM089, SSM017, SSM019, SSM035, SSM094, SSM032, SSM003, SSM031, SSM067, SSM044, SSM001, SSM014, SSM086, SSM033, SSM066, SSM006, SSM085, SSM068, SSM081, SSM040, SSM072, SSM082, SSM020, SSM007, SSM015, SSM078, SSM016, SSM053, SSM005, SSM080, SSM037, SSM077, SSM076, SSM022, SSM010, SSM091, SSM055, SSM070, SSM095, SSM025, SSM034, SSM004, SSM099, SSM043, SSM052, SSM098, SSM049, SSM056, SSM030, SSM063, SSM012

Known Genes

FAM84B, LINC00861, TRIB1

Method

Sequencing

Analysis

Breakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads

Platform

Illumina HiSeq 2000

Comments

Reference

Wong_et_al_2012b

Pubmed ID

23290073

Accession Number(s)

esv2737545

Frequency

Sample Size	96
Observed Gain	0
Observed Loss	96
Observed Complex	0
Frequency	n/a