A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2737361



Internal ID10320997
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr8:100705031..100706630hg38UCSC Ensembl
Outerchr8:101717259..101718858hg19UCSC Ensembl
Cytoband8q22.3
Allele length
AssemblyAllele length
hg381600
hg191600
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6740561, essv6970126, essv6801232, essv6685709, essv6952613, essv6701802, essv6834383, essv6766821, essv6681046, essv6964811, essv6775180, essv6771483, essv6900196, essv6841885, essv6709003, essv6733987, essv6893809, essv6712479, essv6934129, essv6856266, essv6795400, essv6830777, essv6803071, essv6685598, essv6698358, essv6958205, essv6923701, essv6897219, essv6814927, essv6749247, essv6873271
SamplesSSM100, SSM008, SSM071, SSM027, SSM065, SSM087, SSM038, SSM039, SSM009, SSM073, SSM042, SSM041, SSM028, SSM084, SSM018, SSM026, SSM003, SSM001, SSM033, SSM066, SSM081, SSM082, SSM007, SSM077, SSM091, SSM025, SSM099, SSM052, SSM056, SSM012
Known GenesPABPC1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2737361
Frequency
Sample Size96
Observed Gain0
Observed Loss30
Observed Complex0
Frequencyn/a


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