A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2737287



Internal ID10320923
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr8:90056828..90057385hg38UCSC Ensembl
Outerchr8:91069056..91069613hg19UCSC Ensembl
Cytoband8q21.3
Allele length
AssemblyAllele length
hg38558
hg19558
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6860887, essv6787122, essv6908268, essv6818984, essv6976014, essv6881901, essv6890771, essv6808921, essv6823038, essv6838057, essv6887537, essv6856247, essv6677213, essv6900189, essv6870300, essv6811795, essv6904369, essv6827083, essv6672152, essv6964797, essv6712471, essv6701793, essv6948459, essv6708997, essv6958191, essv6927409, essv6808922, essv6861646, essv6720104
SamplesSSM100, SSM083, SSM027, SSM024, SSM075, SSM011, SSM079, SSM087, SSM097, SSM039, SSM013, SSM042, SSM088, SSM041, SSM090, SSM069, SSM029, SSM096, SSM026, SSM019, SSM094, SSM032, SSM031, SSM044, SSM014, SSM078, SSM080, SSM076
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2737287
Frequency
Sample Size96
Observed Gain0
Observed Loss28
Observed Complex0
Frequencyn/a


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