A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2736329



Internal ID9970661
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:46271467..46271857hg38UCSC Ensembl
Outerchr10:47642703..47643093hg19UCSC Ensembl
Cytoband10q11.22
Allele length
AssemblyAllele length
hg38391
hg19391
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv98e201
Supporting Variantsessv6779151, essv6685176, essv6856704, essv6965270, essv6799886, essv6931501, essv6894385, essv6702115, essv6861995, essv6896320, essv6968751, essv6965269, essv6845703, essv6970455, essv6873449, essv6879271, essv6809138, essv6856703, essv6861996, essv6755289, essv6965268, essv6749446, essv6672648, essv6672647, essv6904622, essv6819316, essv6856705, essv6720381, essv6677513, essv6698534, essv6731798, essv6958732, essv6672649
SamplesSSM027, SSM075, SSM087, SSM038, SSM039, SSM013, SSM093, SSM088, SSM058, SSM028, SSM047, SSM026, SSM032, SSM031, SSM067, SSM044, SSM085, SSM072, SSM020, SSM078, SSM005, SSM091, SSM004, SSM098, SSM056, SSM012
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2736329
Frequency
Sample Size96
Observed Gain0
Observed Loss26
Observed Complex0
Frequencyn/a


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