A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2736285



Internal ID9970617
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:46271303..46271887hg38UCSC Ensembl
Outerchr10:47642539..47643123hg19UCSC Ensembl
Cytoband10q11.22
Allele length
AssemblyAllele length
hg38585
hg19585
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6779151, essv6685176, essv6834612, essv6856704, essv6924003, essv6771766, essv6803259, essv6688039, essv6799886, essv6931501, essv6691334, essv6894385, essv6740793, essv6702115, essv6842141, essv6811986, essv6787440, essv6927667, essv6861995, essv6863131, essv6806141, essv6908544, essv6915860, essv6939996, essv6803277, essv6896320, essv6968751, essv6850683, essv6965269, essv6845703, essv6795707, essv6876424, essv6970455, essv6873449, essv6882089, essv6870494, essv6897416, essv6879271, essv6809138, essv6856703, essv6861996, essv6755289, essv6827383, essv6965268, essv6749446, essv6672648, essv6672647, essv6904622, essv6712726, essv6720381, essv6887763, essv6695213, essv6677513, essv6705928, essv6958731, essv6866747, essv6668050, essv6724191, essv6900398, essv6952896, essv6684818, essv6976570, essv6838325, essv6783228, essv6698534, essv6919830, essv6709239, essv6935780, essv6890992, essv6884877, essv6831011, essv6731798, essv6769054, essv6728024, essv6823324, essv6944559, essv6815183, essv6948741, essv6958730
SamplesSSM100, SSM036, SSM008, SSM083, SSM071, SSM027, SSM024, SSM075, SSM045, SSM046, SSM011, SSM079, SSM065, SSM087, SSM038, SSM097, SSM039, SSM013, SSM009, SSM073, SSM093, SSM074, SSM042, SSM088, SSM041, SSM023, SSM058, SSM028, SSM092, SSM084, SSM090, SSM021, SSM047, SSM018, SSM069, SSM029, SSM096, SSM026, SSM089, SSM017, SSM019, SSM035, SSM094, SSM032, SSM031, SSM067, SSM044, SSM014, SSM086, SSM085, SSM068, SSM081, SSM040, SSM072, SSM082, SSM020, SSM016, SSM005, SSM080, SSM037, SSM077, SSM076, SSM022, SSM091, SSM095, SSM025, SSM034, SSM004, SSM099, SSM052, SSM098, SSM056, SSM030, SSM012
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2736285
Frequency
Sample Size96
Observed Gain0
Observed Loss74
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer