A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2735599



Internal ID10319235
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr7:155892086..155893134hg38UCSC Ensembl
Outerchr7:155684780..155685828hg19UCSC Ensembl
Cytoband7q36.3
Allele length
AssemblyAllele length
hg381049
hg191049
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv1141e201
Supporting Variantsessv6845296, essv6957683, essv6908005, essv6964618, essv6743447, essv6858776, essv6826835, essv6818700, essv6799302, essv6795092, essv6855829, essv6876047, essv6890571, essv6826834, essv6866099, essv6884532, essv6861369, essv6708783, essv6890570, essv6811646, essv6849774, essv6684358, essv6975518, essv6808746, essv6904101, essv6706287, essv6671730, essv6705417, essv6757664
SamplesSSM059, SSM071, SSM075, SSM011, SSM087, SSM097, SSM013, SSM088, SSM041, SSM092, SSM029, SSM026, SSM089, SSM031, SSM014, SSM086, SSM006, SSM085, SSM040, SSM072, SSM078, SSM053, SSM080, SSM076, SSM095, SSM034, SSM004
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2735599
Frequency
Sample Size96
Observed Gain0
Observed Loss27
Observed Complex0
Frequencyn/a


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