A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2735584



Internal ID9969914
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:37336630..37371213hg38UCSC Ensembl
Outerchr10:37625558..37660141hg19UCSC Ensembl
Cytoband10p11.21
Allele length
AssemblyAllele length
hg3834584
hg1934584
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6743789, essv6783218, essv6861986, essv6870493, essv6768987, essv6806138, essv6716462, essv6691329, essv6850673, essv6965254
SamplesSSM036, SSM008, SSM027, SSM074, SSM088, SSM090, SSM086, SSM068, SSM053, SSM043
Known GenesLINC00993
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2735584
Frequency
Sample Size96
Observed Gain0
Observed Loss10
Observed Complex0
Frequencyn/a


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