A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2735413



Internal ID3285909
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr7:151820334..151820718hg38UCSC Ensembl
Outerchr7:151517420..151517804hg19UCSC Ensembl
Cytoband7q36.1
Allele length
AssemblyAllele length
hg38385
hg19385
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6975477, essv6818682, essv6849751, essv6861355, essv6957650, essv6881724, essv6855806, essv6826815, essv6866078, essv6671704, essv6698168
SamplesSSM086, SSM078, SSM088, SSM089, SSM031, SSM094, SSM029, SSM087, SSM038, SSM026, SSM080
Known GenesPRKAG2
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2735413
Frequency
Sample Size96
Observed Gain0
Observed Loss11
Observed Complex0
Frequencyn/a


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