A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2735328



Internal ID9969658
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:35150593..35151225hg38UCSC Ensembl
Outerchr10:35439521..35440153hg19UCSC Ensembl
Cytoband10p11.21
Allele length
AssemblyAllele length
hg38633
hg19633
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6904617, essv6850671, essv6799881, essv6803243, essv6935773, essv6768257, essv6731792, essv6783216, essv6695203, essv6779144, essv6768976, essv6809135, essv6952893, essv6709233, essv6827374, essv6771761, essv6919824, essv6897414, essv6970443, essv6712722, essv6681289, essv6842134, essv6944551, essv6976551, essv6912280, essv6691328, essv6787427, essv6791519, essv6702104, essv6931493, essv6968707, essv6716460
SamplesSSM036, SSM008, SSM075, SSM064, SSM065, SSM039, SSM013, SSM009, SSM042, SSM041, SSM023, SSM028, SSM084, SSM021, SSM047, SSM069, SSM029, SSM017, SSM067, SSM086, SSM033, SSM068, SSM072, SSM020, SSM015, SSM080, SSM037, SSM070, SSM025, SSM004, SSM099, SSM043
Known GenesCREM
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2735328
Frequency
Sample Size96
Observed Gain0
Observed Loss32
Observed Complex0
Frequencyn/a


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