A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2735322



Internal ID10318958
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr7:148375750..148379294hg38UCSC Ensembl
Outerchr7:148072842..148076386hg19UCSC Ensembl
Cytoband7q36.1
Allele length
AssemblyAllele length
hg383545
hg193545
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6964439, essv6727502, essv6881716, essv6701496, essv6795060, essv6740321, essv6943872, essv6911699, essv6790909, essv6778591, essv6723615, essv6939414, essv6822796, essv6849738, essv6731244, essv6737256, essv6873082, essv6837800, essv6743434, essv6927161, essv6760322, essv6932051, essv6802859, essv6975458, essv6749021, essv6878895, essv6893891, essv6734615, essv6930849, essv6719807, essv6900012, essv6826804, essv6712207, essv6799270, essv6870092, essv6919269, essv6830540, essv6808725, essv6681621, essv6814678, essv6855794, essv6731586, essv6845272, essv6828743, essv6798777, essv6887324, essv6915400, essv6705393, essv6786806, essv6890549, essv6884515, essv6891132, essv6834139, essv6904073, essv6805762, essv6782591, essv6680755, essv6764198, essv6811629, essv6765251, essv6708757, essv6858520, essv6684336, essv6935133, essv6676956, essv6907982, essv6948210, essv6667761, essv6762873, essv6818672, essv6687584, essv6866067, essv6923443, essv6667154, essv6757646, essv6671693, essv6751889, essv6715894
SamplesSSM100, SSM059, SSM008, SSM083, SSM071, SSM024, SSM075, SSM045, SSM046, SSM011, SSM079, SSM087, SSM097, SSM039, SSM013, SSM009, SSM073, SSM093, SSM050, SSM074, SSM042, SSM041, SSM057, SSM023, SSM090, SSM021, SSM047, SSM018, SSM069, SSM061, SSM029, SSM096, SSM062, SSM089, SSM017, SSM019, SSM035, SSM094, SSM032, SSM003, SSM031, SSM067, SSM044, SSM001, SSM014, SSM086, SSM033, SSM085, SSM068, SSM081, SSM040, SSM072, SSM082, SSM020, SSM007, SSM015, SSM078, SSM016, SSM053, SSM005, SSM080, SSM077, SSM076, SSM022, SSM010, SSM091, SSM070, SSM095, SSM034, SSM004, SSM043, SSM052, SSM098, SSM049, SSM056, SSM030, SSM063, SSM012
Known GenesCNTNAP2
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2735322
Frequency
Sample Size96
Observed Gain0
Observed Loss78
Observed Complex0
Frequencyn/a


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