A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2735307



Internal ID9969637
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr7:147347209..147347740hg38UCSC Ensembl
Outerchr7:147044301..147044832hg19UCSC Ensembl
Cytoband7q35
Allele length
AssemblyAllele length
hg38532
hg19532
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6858509, essv6731241, essv6740317, essv6904071, essv6891110, essv6969797, essv6671691
SamplesSSM013, SSM031, SSM012, SSM011, SSM028, SSM047, SSM052
Known GenesCNTNAP2, MIR548I4
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2735307
Frequency
Sample Size96
Observed Gain0
Observed Loss7
Observed Complex0
Frequencyn/a


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