A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2734928



Internal ID9969258
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:29423202..29423794hg38UCSC Ensembl
Outerchr10:29712131..29712723hg19UCSC Ensembl
Cytoband10p11.23
Allele length
AssemblyAllele length
hg38593
hg19593
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6861978, essv6970437, essv6740785, essv6791516, essv6735898, essv6906385, essv6908531, essv6749437, essv6765579, essv6731785, essv6870490, essv6845696, essv6952890, essv6976542, essv6831003, essv6809129, essv6787421, essv6958712, essv6720371, essv6850661, essv6803221, essv6779139, essv6832565, essv6897406, essv6716452, essv6709229, essv6873445, essv6743784, essv6896220, essv6876420, essv6948731, essv6724184, essv6681285, essv6823314, essv6904610, essv6783211, essv6919819, essv6806135, essv6856681, essv6965241, essv6771758, essv6698526, essv6688027, essv6695197, essv6691325, essv6734969, essv6887758, essv6799876, essv6884870, essv6768251, essv6923989, essv6702097, essv6879259, essv6927660, essv6834603, essv6827370, essv6944546, essv6894378, essv6931486, essv6775411, essv6712720, essv6685109
SamplesSSM036, SSM027, SSM024, SSM075, SSM045, SSM064, SSM079, SSM065, SSM087, SSM038, SSM039, SSM013, SSM009, SSM093, SSM074, SSM042, SSM088, SSM002, SSM041, SSM023, SSM028, SSM092, SSM090, SSM047, SSM018, SSM069, SSM029, SSM096, SSM026, SSM017, SSM019, SSM035, SSM067, SSM044, SSM014, SSM086, SSM033, SSM066, SSM085, SSM068, SSM081, SSM072, SSM082, SSM020, SSM007, SSM053, SSM005, SSM080, SSM037, SSM010, SSM091, SSM070, SSM095, SSM025, SSM099, SSM043, SSM052, SSM098, SSM049, SSM056, SSM063, SSM012
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2734928
Frequency
Sample Size96
Observed Gain0
Observed Loss62
Observed Complex0
Frequencyn/a


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