A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2734692



Internal ID10318328
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr7:77175027..77176533hg38UCSC Ensembl
Outerchr7:76804344..76805850hg19UCSC Ensembl
Cytoband7q11.23
Allele length
AssemblyAllele length
hg381507
hg191507
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6790828, essv6762810, essv6765200, essv6857654, essv6893810, essv6698113, essv6896971, essv6681032, essv6975314, essv6734566, essv6855674, essv6798131, essv6899936, essv6754782, essv6730887, essv6705521, essv6957519, essv6890457, essv6760261, essv6680680, essv6687501, essv6964215, essv6676869
SamplesSSM100, SSM027, SSM011, SSM087, SSM038, SSM097, SSM009, SSM058, SSM061, SSM029, SSM062, SSM026, SSM035, SSM032, SSM033, SSM006, SSM007, SSM005, SSM070, SSM099, SSM098, SSM049, SSM063
Known GenesCCDC146
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2734692
Frequency
Sample Size96
Observed Gain0
Observed Loss23
Observed Complex0
Frequencyn/a


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