A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2734683



Internal ID9969012
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:27752308..27753407hg38UCSC Ensembl
Outerchr10:28041237..28042336hg19UCSC Ensembl
Cytoband10p12.1
Allele length
AssemblyAllele length
hg381100
hg191100
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6866730, essv6819294, essv6758002, essv6771757, essv6677504, essv6709131
SamplesSSM059, SSM065, SSM089, SSM032, SSM006, SSM078
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2734683
Frequency
Sample Size96
Observed Gain0
Observed Loss6
Observed Complex0
Frequencyn/a


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