A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2734406



Internal ID10318042
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:26709945..26713245hg38UCSC Ensembl
Outerchr10:26998874..27002174hg19UCSC Ensembl
Cytoband10p12.1
Allele length
AssemblyAllele length
hg383301
hg193301
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6768943, essv6775410, essv6896198, essv6832532, essv6763183, essv6803256, essv6935767, essv6791512, essv6752328, essv6845693, essv6906362, essv6668042, essv6709109, essv6897402, essv6976533, essv6842128, essv6965237, essv6724179, essv6737653, essv6681282, essv6677502, essv6720368, essv6743782
SamplesSSM008, SSM027, SSM045, SSM073, SSM050, SSM002, SSM057, SSM084, SSM021, SSM029, SSM062, SSM032, SSM044, SSM033, SSM066, SSM006, SSM085, SSM053, SSM010, SSM070, SSM099, SSM030, SSM012
Known GenesPDSS1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2734406
Frequency
Sample Size96
Observed Gain0
Observed Loss23
Observed Complex0
Frequencyn/a


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