A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2734231



Internal ID9968558
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr7:33308867..33309645hg38UCSC Ensembl
Outerchr7:33348479..33349257hg19UCSC Ensembl
Cytoband7p14.3
Allele length
AssemblyAllele length
hg38779
hg19779
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6743336, essv6830386, essv6757557, essv6740207, essv6746107, essv6878775, essv6737145, essv6952154, essv6935009, essv6957417, essv6731108, essv6705187
SamplesSSM059, SSM093, SSM050, SSM021, SSM047, SSM026, SSM006, SSM081, SSM053, SSM055, SSM025, SSM052
Known GenesBBS9
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2734231
Frequency
Sample Size96
Observed Gain0
Observed Loss12
Observed Complex0
Frequencyn/a


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