A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2734106



Internal ID10317742
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:24746066..24746628hg38UCSC Ensembl
Outerchr10:25034995..25035557hg19UCSC Ensembl
Cytoband10p12.1
Allele length
AssemblyAllele length
hg38563
hg19563
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6935761, essv6976522, essv6752326, essv6768920, essv6965232, essv6827361, essv6737651, essv6856673, essv6866723, essv6819285, essv6861973, essv6672616, essv6765573, essv6958700
SamplesSSM008, SSM027, SSM087, SSM050, SSM088, SSM057, SSM021, SSM029, SSM026, SSM089, SSM031, SSM078, SSM080, SSM063
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2734106
Frequency
Sample Size96
Observed Gain0
Observed Loss14
Observed Complex0
Frequencyn/a


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