A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2734040



Internal ID10317676
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:23346354..23346970hg38UCSC Ensembl
Outerchr10:23635283..23635899hg19UCSC Ensembl
Cytoband10p12.2
Allele length
AssemblyAllele length
hg38617
hg19617
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6688019, essv6965230, essv6734963, essv6684803, essv6856672, essv6850652, essv6724176, essv6698521, essv6672614, essv6976521, essv6894371, essv6677494, essv6819284, essv6695184, essv6861971, essv6887753, essv6866722, essv6958697, essv6795689
SamplesSSM071, SSM027, SSM045, SSM087, SSM038, SSM088, SSM029, SSM096, SSM026, SSM089, SSM035, SSM032, SSM031, SSM086, SSM078, SSM037, SSM034, SSM098, SSM049
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2734040
Frequency
Sample Size96
Observed Gain0
Observed Loss19
Observed Complex0
Frequencyn/a


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