A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2733566



Internal ID10317202
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:170149202..170149760hg38UCSC Ensembl
Outerchr6:170464426..170464984hg19UCSC Ensembl
Cytoband6q27
Allele length
AssemblyAllele length
hg38559
hg19559
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6957308, essv6865783, essv6875870, essv6680055, essv6957306, essv6805572, essv6690635, essv6712001, essv6964010, essv6849382, essv6855477, essv6881549, essv6899824, essv6833934, essv6878731, essv6802692, essv6907748, essv6811444, essv6856410, essv6671383, essv6890347, essv6694353, essv6872905, essv6861061, essv6808559
SamplesSSM100, SSM036, SSM027, SSM075, SSM011, SSM087, SSM097, SSM073, SSM093, SSM074, SSM042, SSM088, SSM092, SSM026, SSM089, SSM094, SSM031, SSM014, SSM086, SSM082, SSM005, SSM037, SSM076, SSM091
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2733566
Frequency
Sample Size96
Observed Gain0
Observed Loss24
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer