A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2733115



Internal ID9967437
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:163322835..163323268hg38UCSC Ensembl
Outerchr6:163743867..163744300hg19UCSC Ensembl
Cytoband6q26
Allele length
AssemblyAllele length
hg38434
hg19434
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv1032e201
Supporting Variantsessv6676704, essv6719572, essv6730999, essv6715660, essv6774699, essv6845072, essv6698021, essv6889088
SamplesSSM038, SSM047, SSM032, SSM044, SSM066, SSM085, SSM043, SSM012
Known GenesPACRG-AS1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2733115
Frequency
Sample Size96
Observed Gain0
Observed Loss8
Observed Complex0
Frequencyn/a


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