A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2732886



Internal ID10316522
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:150372495..150372792hg38UCSC Ensembl
Outerchr6:150693631..150693928hg19UCSC Ensembl
Cytoband6q25.1
Allele length
AssemblyAllele length
hg38298
hg19298
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6723337, essv6963904, essv6929673, essv6705141, essv6952013, essv6826524, essv6778303, essv6734440, essv6694272, essv6849302
SamplesSSM027, SSM045, SSM003, SSM067, SSM086, SSM040, SSM080, SSM037, SSM025, SSM049
Known GenesIYD
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2732886
Frequency
Sample Size96
Observed Gain0
Observed Loss10
Observed Complex0
Frequencyn/a


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