A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2732884



Internal ID10316520
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:10938574..10939421hg38UCSC Ensembl
Outerchr10:10980537..10981384hg19UCSC Ensembl
Cytoband10p14
Allele length
AssemblyAllele length
hg38848
hg19848
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6866702, essv6775396, essv6906240, essv6842113, essv6936129, essv6927642, essv6939974, essv6771738, essv6765563, essv6695173, essv6740768, essv6763166, essv6968540, essv6896087, essv6935749, essv6760712, essv6958678, essv6779123, essv6757990, essv6734951, essv6931459, essv6749419, essv6768865, essv6746568, essv6965210, essv6827351, essv6912264, essv6684790, essv6923967, essv6832410, essv6856655, essv6819270, essv6681271, essv6699265, essv6803099, essv6708987, essv6716434, essv6861953, essv6737641, essv6952872, essv6752314, essv6915840
SamplesSSM059, SSM008, SSM027, SSM065, SSM087, SSM009, SSM050, SSM088, SSM002, SSM057, SSM084, SSM021, SSM018, SSM061, SSM062, SSM026, SSM089, SSM019, SSM003, SSM067, SSM001, SSM033, SSM066, SSM006, SSM020, SSM015, SSM078, SSM016, SSM080, SSM037, SSM022, SSM010, SSM055, SSM025, SSM034, SSM004, SSM043, SSM052, SSM049, SSM056, SSM063, SSM012
Known GenesLINC00710
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2732884
Frequency
Sample Size96
Observed Gain0
Observed Loss42
Observed Complex0
Frequencyn/a


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