A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2732561



Internal ID10316197
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:8739992..8740368hg38UCSC Ensembl
Outerchr10:8781955..8782331hg19UCSC Ensembl
Cytoband10p14
Allele length
AssemblyAllele length
hg38377
hg19377
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6698513, essv6850627, essv6842108, essv6976492, essv6809114, essv6702072, essv6830984, essv6771736, essv6799861, essv6856647, essv6684788, essv6787401, essv6944526, essv6879245, essv6823297, essv6861947, essv6727991, essv6827347, essv6681267, essv6927638, essv6887737, essv6845679, essv6677477, essv6806124, essv6904592, essv6866696, essv6712708, essv6908502, essv6672588, essv6746566, essv6724162, essv6791495, essv6958670, essv6890961, essv6720349, essv6965202, essv6882064, essv6862842, essv6897385
SamplesSSM027, SSM075, SSM045, SSM046, SSM011, SSM079, SSM065, SSM087, SSM038, SSM097, SSM039, SSM013, SSM093, SSM074, SSM042, SSM088, SSM023, SSM084, SSM069, SSM029, SSM096, SSM026, SSM089, SSM019, SSM094, SSM032, SSM031, SSM044, SSM014, SSM086, SSM033, SSM085, SSM081, SSM072, SSM080, SSM055, SSM070, SSM034, SSM099
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2732561
Frequency
Sample Size96
Observed Gain0
Observed Loss39
Observed Complex0
Frequencyn/a


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