A curated catalogue of human genomic structural variation

Variant Details

Variant: esv2732085

Internal ID9966403
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:52752080..52833441hg38UCSC Ensembl
Outerchr6:52616878..52698239hg19UCSC Ensembl
Allele length
AssemblyAllele length
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6939034, essv6884254, essv6869768, essv6888032, essv6795698, essv6969394, essv6687261, essv6907585, essv6782234, essv6684006, essv6743189, essv6719454, essv6678855, essv6855365, essv6955483, essv6708461, essv6708462, essv6951925, essv6687263, essv6890238, essv6907583, essv6778220, essv6730903, essv6798882, essv6730905, essv6794674, essv6872778, essv6761154, essv6855377, essv6805455, essv6805453, essv6794673, essv6903738, essv6671133, essv6808439, essv6849159, essv6865611, essv6930458, essv6730904, essv6923093, essv6833804, essv6896781, essv6872781, essv6680414, essv6855388, essv6855249, essv6918849, essv6678866, essv6947815, essv6676591, essv6907586, essv6963760, essv6676592, essv6790531, essv6911360, essv6671135, essv6786419, essv6926831, essv6687262, essv6770848, essv6694178, essv6719455, essv6961407, essv6684005, essv6915094, essv6934746, essv6705050, essv6974809, essv6715548, essv6729031, essv6918850, essv6774611, essv6811330, essv6822456, essv6947814, essv6676590, essv6802580, essv6727133, essv6891820, essv6841278, essv6723255, essv6887025, essv6818240, essv6814339, essv6875740, essv6701100, essv6715547, essv6875743, essv6690480, essv6723256, essv6767556, essv6757411, essv6878639, essv6711860, essv6822455, essv6844971, essv6955594, essv6961385, essv6881432, essv6963758, essv6872779, essv6697923, essv6888044, essv6934745, essv6767555, essv6774607, essv6830196, essv6957036, essv6961396, essv6690482, essv6899724, essv6884255, essv6943456, essv6957035, essv6890237, essv6943457, essv6711861, essv6899725, essv6774608, essv6969395, essv6711862, essv6926829, essv6727134, essv6896782, essv6893551, essv6743190, essv6765036, essv6802581, essv6957037, essv6837451, essv6844970, essv6893550, essv6951926, essv6878638, essv6837452, essv6860888, essv6872780, essv6808440, essv6918848, essv6841279, essv6794672, essv6703943, essv6814340, essv6715549, essv6760051, essv6826431, essv6826209, essv6694179, essv6748762, essv6837450, essv6878637, essv6694180, essv6701098, essv6891709, essv6678844, essv6888055, essv6903739, essv6778222, essv6790533, essv6671134, essv6841277, essv6930459, essv6736970, essv6963759, essv6928795, essv6690483, essv6754556, essv6761142, essv6811329, essv6761131, essv6808441, essv6911361, essv6703932, essv6923094, essv6680413, essv6711859, essv6875741, essv6719456, essv6830194, essv6855250, essv6974808, essv6915093, essv6795710, essv6798883, essv6811331, essv6865612, essv6955372, essv6844969, essv6939033, essv6774610, essv6826220, essv6830195, essv6849160, essv6690481, essv6899723, essv6951924, essv6881433, essv6705049, essv6745949, essv6887026, essv6826430, essv6786420, essv6794671, essv6855251, essv6888021, essv6729020, essv6727135
SamplesSSM010, SSM065, SSM022, SSM007, SSM027, SSM092, SSM013, SSM053, SSM082, SSM086, SSM006, SSM036, SSM055, SSM091, SSM033, SSM084, SSM061, SSM099, SSM042, SSM040, SSM078, SSM043, SSM088, SSM089, SSM090, SSM064, SSM031, SSM035, SSM025, SSM072, SSM020, SSM071, SSM016, SSM001, SSM032, SSM039, SSM024, SSM045, SSM067, SSM094, SSM083, SSM050, SSM097, SSM041, SSM077, SSM005, SSM012, SSM093, SSM100, SSM056, SSM085, SSM017, SSM009, SSM011, SSM066, SSM028, SSM029, SSM003, SSM095, SSM047, SSM073, SSM069, SSM021, SSM002, SSM037, SSM034, SSM063, SSM087, SSM038, SSM046, SSM019, SSM096, SSM023, SSM079, SSM068, SSM044, SSM074, SSM004, SSM075, SSM015, SSM026, SSM014, SSM008, SSM098, SSM018, SSM076, SSM058, SSM059, SSM081, SSM070, SSM080
Known GenesGSTA1, GSTA2, GSTA5
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Pubmed ID23290073
Accession Number(s)esv2732085
Sample Size96
Observed Gain0
Observed Loss91
Observed Complex0

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