A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2732081



Internal ID9966399
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:52537026..52545566hg38UCSC Ensembl
Outerchr6:52401824..52410364hg19UCSC Ensembl
Cytoband6p12.2
Allele length
AssemblyAllele length
hg388541
hg198541
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6690479
SamplesSSM036
Known GenesTRAM2
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2732081
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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