A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2731869



Internal ID10315505
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:32708762..32709248hg38UCSC Ensembl
Outerchr6:32676539..32677025hg19UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg38487
hg19487
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6934718, essv6875722, essv6928607, essv6676570, essv6899713, essv6896766, essv6694157, essv6687246, essv6760786, essv6739969, essv6952817, essv6887833, essv6754537, essv6730890, essv6711840, essv6727121, essv6701080, essv6790509, essv6778201, essv6887013, essv6956998, essv6798863, essv6869758, essv6943424, essv6678655, essv6822436, essv6708447, essv6826403, essv6939016, essv6969359, essv6844947, essv6728809, essv6837432, essv6830178, essv6833794, essv6884240, essv6805440, essv6770829, essv6683990, essv6918832, essv6751583, essv6974759, essv6860868, essv6888932, essv6705037, essv6951905, essv6795521, essv6907564, essv6865585, essv6719434, essv6671096, essv6782215, essv6963726, essv6855154, essv6911344, essv6890225, essv6881423, essv6723245, essv6947792, essv6774587, essv6923076, essv6818206, essv6767541, essv6855218, essv6690460, essv6667557, essv6757391, essv6849118, essv6841259, essv6802570, essv6926811, essv6814326, essv6872762, essv6826065, essv6811313, essv6697907, essv6748740, essv6794645, essv6808428, essv6961151, essv6930430, essv6903722
SamplesSSM100, SSM059, SSM036, SSM008, SSM083, SSM071, SSM027, SSM024, SSM075, SSM045, SSM046, SSM011, SSM064, SSM079, SSM065, SSM087, SSM038, SSM097, SSM039, SSM013, SSM009, SSM073, SSM074, SSM042, SSM088, SSM002, SSM041, SSM057, SSM023, SSM058, SSM028, SSM092, SSM084, SSM090, SSM021, SSM047, SSM018, SSM029, SSM096, SSM026, SSM089, SSM017, SSM019, SSM035, SSM094, SSM032, SSM003, SSM031, SSM067, SSM044, SSM001, SSM014, SSM086, SSM066, SSM085, SSM068, SSM081, SSM040, SSM072, SSM082, SSM020, SSM007, SSM015, SSM078, SSM005, SSM080, SSM037, SSM077, SSM076, SSM022, SSM010, SSM091, SSM070, SSM095, SSM025, SSM034, SSM004, SSM099, SSM052, SSM056, SSM030, SSM012
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2731869
Frequency
Sample Size96
Observed Gain0
Observed Loss82
Observed Complex0
Frequencyn/a


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