A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2731861



Internal ID10315497
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:32626631..32628666hg38UCSC Ensembl
Outerchr6:32594408..32596443hg19UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg382036
hg192036
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6907560, essv6855142, essv6715518, essv6730881, essv6770826, essv6952706, essv6739968, essv6878627, essv6719424, essv6790505, essv6786394, essv6888487, essv6930425, essv6939007, essv6778193, essv6802568, essv6893527, essv6837426, essv6899705, essv6974757, essv6754528, essv6934702, essv6887010, essv6903718, essv6915076, essv6890223, essv6795365
SamplesSSM100, SSM083, SSM011, SSM065, SSM097, SSM013, SSM009, SSM073, SSM093, SSM002, SSM058, SSM021, SSM047, SSM069, SSM029, SSM096, SSM067, SSM044, SSM001, SSM014, SSM020, SSM016, SSM022, SSM070, SSM043, SSM052, SSM098
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2731861
Frequency
Sample Size96
Observed Gain0
Observed Loss27
Observed Complex0
Frequencyn/a


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