A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2731857



Internal ID10315493
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:32624161..32624965hg38UCSC Ensembl
Outerchr6:32591938..32592742hg19UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg38805
hg19805
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6907559, essv6826395, essv6818202, essv6963713, essv6974755, essv6802566, essv6833782, essv6786392, essv6765007, essv6884229, essv6860855, essv6795354, essv6762635
SamplesSSM027, SSM009, SSM073, SSM088, SSM069, SSM029, SSM062, SSM014, SSM082, SSM078, SSM080, SSM095, SSM063
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2731857
Frequency
Sample Size96
Observed Gain0
Observed Loss13
Observed Complex0
Frequencyn/a


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