A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2731852



Internal ID10315488
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:32594154..32596825hg38UCSC Ensembl
Outerchr6:32561931..32564602hg19UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg382672
hg192672
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6855120, essv6678600, essv6830170, essv6701069, essv6887007, essv6708437, essv6928462, essv6794641, essv6778192, essv6765006, essv6671087, essv6855206, essv6805430, essv6903716, essv6734344, essv6881412, essv6875707, essv6907557, essv6814318, essv6767527, essv6825965, essv6808414, essv6790503, essv6918809, essv6739966, essv6930423, essv6869740, essv6961017, essv6748733, essv6798847, essv6963710, essv6730879, essv6760697, essv6728710, essv6939004, essv6926801, essv6711830, essv6683985, essv6893524, essv6947779, essv6841251, essv6795343, essv6888265, essv6745929, essv6802564, essv6680385, essv6969355, essv6822429, essv6865582, essv6956984, essv6849106, essv6743164, essv6676554, essv6754526, essv6762633, essv6723229, essv6826393, essv6770825, essv6818200, essv6667551, essv6703698, essv6923065, essv6911338, essv6727112, essv6899704, essv6751579, essv6705019, essv6782197, essv6837424, essv6952595, essv6890219, essv6833780, essv6694150, essv6757383, essv6872752, essv6786390, essv6943418, essv6719422, essv6844941, essv6878625, essv6715516, essv6951891, essv6687237, essv6915075, essv6760021, essv6690441, essv6884228, essv6974753, essv6811305, essv6860851, essv6774580, essv6934701
SamplesSSM100, SSM059, SSM036, SSM008, SSM083, SSM071, SSM027, SSM024, SSM075, SSM045, SSM046, SSM011, SSM064, SSM079, SSM065, SSM087, SSM097, SSM039, SSM013, SSM009, SSM073, SSM093, SSM074, SSM042, SSM088, SSM002, SSM041, SSM057, SSM023, SSM058, SSM028, SSM092, SSM084, SSM090, SSM021, SSM047, SSM018, SSM069, SSM061, SSM029, SSM096, SSM062, SSM026, SSM089, SSM017, SSM019, SSM035, SSM094, SSM032, SSM003, SSM031, SSM067, SSM044, SSM001, SSM014, SSM086, SSM033, SSM066, SSM006, SSM085, SSM068, SSM081, SSM040, SSM072, SSM082, SSM020, SSM007, SSM015, SSM078, SSM016, SSM053, SSM005, SSM080, SSM037, SSM077, SSM076, SSM022, SSM010, SSM091, SSM055, SSM070, SSM095, SSM025, SSM034, SSM004, SSM043, SSM052, SSM098, SSM049, SSM056, SSM030, SSM063
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2731852
Frequency
Sample Size96
Observed Gain0
Observed Loss92
Observed Complex0
Frequencyn/a


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