Variant DetailsVariant: esv2731778 Internal ID | 9966096 | Landmark | | Location Information | | Cytoband | 6p22.1 | Allele length | Assembly | Allele length | hg38 | 64174 | hg19 | 64174 |
| Variant Type | CNV deletion | Copy Number | | Allele State | | Allele Origin | | Probe Count | | Validation Flag | | Merged Status | M | Merged Variants | | Supporting Variants | essv6683956, essv6837395, essv6911303, essv6790462, essv6949928, essv6708378, essv6893483, essv6911304, essv6736929, essv6918715, essv6950151, essv6764963, essv6808349, essv6844866, essv6974701, essv6762592, essv6841191, essv6918714, essv6884169, essv6683957, essv6849059, essv6818163, essv6715466, essv6869655, essv6837401, essv6794643, essv6802538, essv6878577, essv6938935, essv6728287, essv6802537, essv6708377, essv6818152, essv6943337, essv6802530, essv6844868, essv6770746, essv6808348, essv6711788, essv6730839, essv6949262, essv6963645, essv6687206, essv6811262, essv6899638, essv6911292, essv6849058, essv6881708, essv6899640, essv6927773, essv6890176, essv6841207, essv6790463, essv6708379, essv6849057, essv6860767, essv6730829, essv6860763, essv6869651, essv6938934, essv6963649, essv6927751, essv6896749, essv6927762, essv6974702, essv6697893, essv6860765, essv6884170, essv6844869, essv6893484, essv6918719, essv6974703, essv6736930, essv6938936, essv6770767, essv6811263, essv6770768, essv6790464, essv6728298, essv6903686, essv6837396, essv6893485, essv6715464, essv6896748 | Samples | SSM065, SSM022, SSM007, SSM027, SSM013, SSM086, SSM084, SSM099, SSM042, SSM078, SSM043, SSM088, SSM090, SSM035, SSM001, SSM083, SSM050, SSM097, SSM041, SSM062, SSM093, SSM100, SSM085, SSM017, SSM009, SSM029, SSM003, SSM095, SSM047, SSM073, SSM002, SSM034, SSM063, SSM038, SSM023, SSM075, SSM015, SSM098, SSM076, SSM070 | Known Genes | HCG9, HLA-A, HLA-J, ZNRD1-AS1 | Method | Sequencing | Analysis | Breakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads | Platform | Illumina HiSeq 2000 | Comments | | Reference | Wong_et_al_2012b | Pubmed ID | 23290073 | Accession Number(s) | esv2731778
| Frequency | Sample Size | 96 | Observed Gain | 0 | Observed Loss | 40 | Observed Complex | 0 | Frequency | n/a |
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