A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2731757



Internal ID9966075
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:29004449..29004529hg38UCSC Ensembl
Outerchr6:28972226..28972306hg19UCSC Ensembl
Cytoband6p22.1
Allele length
AssemblyAllele length
hg3881
hg1981
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6818144, essv6956906, essv6963625
SamplesSSM027, SSM078, SSM026
Known GenesZNF311
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2731757
Frequency
Sample Size96
Observed Gain0
Observed Loss3
Observed Complex0
Frequencyn/a


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