A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2731572



Internal ID10315208
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:4247854..4249491hg38UCSC Ensembl
Outerchr10:4290046..4291683hg19UCSC Ensembl
Cytoband10p15.1
Allele length
AssemblyAllele length
hg381638
hg191638
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6935733, essv6832277, essv6783175, essv6842099, essv6927622, essv6724150, essv6749407, essv6702063, essv6720341, essv6811948, essv6802954, essv6900361, essv6734944, essv6672567, essv6894347, essv6856628, essv6944513, essv6731758, essv6698503, essv6752302, essv6876392, essv6716417, essv6884846, essv6976464, essv6958648, essv6746553, essv6879234, essv6873419, essv6681255, essv6712694, essv6737629, essv6779107, essv6735665, essv6906096, essv6768226, essv6768665, essv6803233, essv6771725, essv6861934, essv6815146, essv6923946, essv6765549, essv6830972, essv6850605, essv6755254, essv6698710, essv6684920, essv6866681, essv6743759, essv6887725, essv6970403, essv6787388, essv6727980, essv6939963, essv6684777, essv6709205, essv6763157, essv6688001, essv6965188, essv6895943, essv6668030, essv6870466, essv6799851, essv6691291, essv6952856, essv6705891, essv6948694, essv6845667, essv6823285, essv6708876, essv6677466, essv6904581, essv6908493, essv6760699, essv6915827, essv6806111, essv6882057, essv6809104, essv6834579, essv6795662, essv6740754, essv6862731, essv6757972, essv6936041, essv6890953, essv6695156, essv6819246, essv6968418, essv6791481, essv6775381, essv6919787, essv6897371, essv6931446, essv6827335, essv6912239
SamplesSSM100, SSM059, SSM036, SSM008, SSM071, SSM027, SSM024, SSM075, SSM045, SSM046, SSM011, SSM064, SSM079, SSM065, SSM087, SSM038, SSM097, SSM039, SSM013, SSM009, SSM073, SSM093, SSM050, SSM074, SSM042, SSM088, SSM002, SSM041, SSM057, SSM023, SSM058, SSM028, SSM092, SSM084, SSM090, SSM021, SSM047, SSM018, SSM069, SSM061, SSM029, SSM096, SSM062, SSM026, SSM089, SSM017, SSM019, SSM035, SSM094, SSM032, SSM003, SSM031, SSM067, SSM044, SSM001, SSM014, SSM086, SSM033, SSM066, SSM006, SSM085, SSM068, SSM081, SSM040, SSM072, SSM082, SSM020, SSM007, SSM015, SSM078, SSM016, SSM053, SSM005, SSM080, SSM037, SSM077, SSM076, SSM022, SSM010, SSM091, SSM055, SSM070, SSM095, SSM025, SSM034, SSM004, SSM099, SSM043, SSM052, SSM098, SSM049, SSM056, SSM030, SSM063, SSM012
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2731572
Frequency
Sample Size96
Observed Gain0
Observed Loss95
Observed Complex0
Frequencyn/a


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