A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2731363



Internal ID9965680
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:602099..602849hg38UCSC Ensembl
Outerchr6:602099..602849hg19UCSC Ensembl
Cytoband6p25.3
Allele length
AssemblyAllele length
hg38751
hg19751
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6676437, essv6876376, essv6837316, essv6907420, essv6670962, essv6680294, essv6878524, essv6711725, essv6884123, essv6943484, essv6865451, essv6694047, essv6918631, essv6890102, essv6963543, essv6727027, essv6934590
SamplesSSM027, SSM033, SSM042, SSM089, SSM031, SSM001, SSM032, SSM083, SSM097, SSM093, SSM017, SSM095, SSM021, SSM002, SSM037, SSM046, SSM014
Known GenesEXOC2
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2731363
Frequency
Sample Size96
Observed Gain0
Observed Loss17
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer