A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2730162



Internal ID9964478
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:1558129..1559200hg38UCSC Ensembl
Outerchr10:1600324..1601395hg19UCSC Ensembl
Cytoband10p15.3
Allele length
AssemblyAllele length
hg381072
hg191072
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6724139, essv6827324, essv6948677, essv6716401, essv6672545, essv6691282, essv6775366, essv6904568, essv6944498, essv6823273, essv6976432, essv6970389, essv6935715, essv6771710, essv6834568
SamplesSSM036, SSM024, SSM045, SSM079, SSM065, SSM013, SSM023, SSM028, SSM021, SSM029, SSM031, SSM066, SSM082, SSM080, SSM043
Known GenesADARB2
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2730162
Frequency
Sample Size96
Observed Gain0
Observed Loss15
Observed Complex0
Frequencyn/a


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