A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2730025



Internal ID9964340
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr5:32356046..32364166hg38UCSC Ensembl
Outerchr5:32356152..32364272hg19UCSC Ensembl
Cytoband5p13.3
Allele length
AssemblyAllele length
hg388121
hg198121
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6899479
SamplesSSM100
Known GenesZFR
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2730025
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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