A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2729417



Internal ID9963732
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:1099677..1100208hg38UCSC Ensembl
Outerchr10:1145617..1146148hg19UCSC Ensembl
Cytoband10p15.3
Allele length
AssemblyAllele length
hg38532
hg19532
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6850573, essv6935896, essv6923922, essv6965156, essv6672534, essv6768487, essv6787365, essv6895754, essv6927604, essv6939943, essv6771698, essv6876380, essv6952830, essv6755244, essv6856606, essv6740739, essv6775361, essv6677448, essv6912224
SamplesSSM008, SSM027, SSM065, SSM087, SSM058, SSM092, SSM018, SSM069, SSM019, SSM032, SSM003, SSM031, SSM086, SSM066, SSM015, SSM022, SSM025, SSM052, SSM012
Known GenesWDR37
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2729417
Frequency
Sample Size96
Observed Gain0
Observed Loss19
Observed Complex0
Frequencyn/a


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