A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2728766



Internal ID10312402
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr4:174264913..174265544hg38UCSC Ensembl
Outerchr4:175186064..175186695hg19UCSC Ensembl
Cytoband4q34.1
Allele length
AssemblyAllele length
hg38632
hg19632
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6826019, essv6903400, essv6854662, essv6829839, essv6748467, essv6790144, essv6715150, essv6757187, essv6802303, essv6930080, essv6745652, essv6700650, essv6918380, essv6693789, essv6963081, essv6670534
SamplesSSM008, SSM027, SSM087, SSM039, SSM013, SSM073, SSM017, SSM031, SSM081, SSM020, SSM080, SSM037, SSM055, SSM070, SSM043, SSM056
Known GenesFBXO8
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2728766
Frequency
Sample Size96
Observed Gain0
Observed Loss16
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer