A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2727288



Internal ID10310924
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr4:22431208..22431424hg38UCSC Ensembl
Outerchr4:22432831..22433047hg19UCSC Ensembl
Cytoband4p15.2
Allele length
AssemblyAllele length
hg38217
hg19217
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6755454, essv6667263
SamplesSSM008, SSM030
Known GenesGPR125
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2727288
Frequency
Sample Size96
Observed Gain0
Observed Loss2
Observed Complex0
Frequencyn/a


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