A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2726837



Internal ID9961145
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr4:2334730..2335017hg38UCSC Ensembl
Outerchr4:2336457..2336744hg19UCSC Ensembl
Cytoband4p16.3
Allele length
AssemblyAllele length
hg38288
hg19288
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6767061, essv6711287, essv6934067
SamplesSSM064, SSM042, SSM021
Known GenesZFYVE28
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2726837
Frequency
Sample Size96
Observed Gain0
Observed Loss3
Observed Complex0
Frequencyn/a


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