A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2726486



Internal ID10310122
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr3:195710744..195711416hg38UCSC Ensembl
Outerchr3:195437615..195438287hg19UCSC Ensembl
Cytoband3q29
Allele length
AssemblyAllele length
hg38673
hg19673
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6926277, essv6836818, essv6886492, essv6973661, essv6892923, essv6777583, essv6700391, essv6813774, essv6770212, essv6864811, essv6670084, essv6836819, essv6675884, essv6794025, essv6770211, essv6679837
SamplesSSM083, SSM071, SSM065, SSM039, SSM029, SSM096, SSM089, SSM019, SSM032, SSM031, SSM067, SSM033, SSM077, SSM098
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2726486
Frequency
Sample Size96
Observed Gain0
Observed Loss14
Observed Complex0
Frequencyn/a


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