A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2726376



Internal ID10310012
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr3:190237609..190237925hg38UCSC Ensembl
Outerchr3:189955398..189955714hg19UCSC Ensembl
Cytoband3q28
Allele length
AssemblyAllele length
hg38317
hg19317
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6955903, essv6833195, essv6813760, essv6899147, essv6869217, essv6880923, essv6718782, essv6875220, essv6849876, essv6686701, essv6962626, essv6817397, essv6675867, essv6878146, essv6836794, essv6854269, essv6973632, essv6777565, essv6883751, essv6829608, essv6860023, essv6892903, essv6896315, essv6807919
SamplesSSM100, SSM083, SSM027, SSM075, SSM011, SSM087, SSM093, SSM088, SSM092, SSM090, SSM029, SSM026, SSM035, SSM094, SSM032, SSM067, SSM044, SSM081, SSM082, SSM078, SSM077, SSM095, SSM099, SSM098
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2726376
Frequency
Sample Size96
Observed Gain0
Observed Loss24
Observed Complex0
Frequencyn/a


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