A curated catalogue of human genomic structural variation

Variant Details

Variant: esv2726368

Internal ID9960675
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr3:189858068..189858476hg38UCSC Ensembl
Outerchr3:189575857..189576265hg19UCSC Ensembl
Allele length
AssemblyAllele length
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6880921, essv6872233, essv6938348, essv6864789, essv6848117, essv6926255, essv6679814, essv6670060, essv6745428, essv6789841, essv6854268, essv6730256, essv6689860, essv6896314, essv6962624, essv6817396, essv6699822, essv6711242, essv6804953, essv6813759, essv6836793, essv6781575, essv6726486, essv6934008, essv6770195, essv6883749, essv6693516, essv6825713, essv6922457, essv6675866, essv6903139, essv6951260, essv6968663, essv6899145, essv6683402, essv6849865, essv6892901, essv6889595, essv6754031, essv6910712, essv6718781, essv6748272, essv6947171, essv6700373, essv6767021, essv6810812, essv6860022, essv6869215, essv6973630, essv6707853, essv6785724, essv6878144, essv6886474
SamplesSSM065, SSM022, SSM027, SSM013, SSM086, SSM006, SSM036, SSM055, SSM091, SSM033, SSM099, SSM042, SSM078, SSM088, SSM089, SSM090, SSM064, SSM031, SSM025, SSM032, SSM039, SSM024, SSM094, SSM083, SSM097, SSM041, SSM077, SSM093, SSM100, SSM056, SSM011, SSM028, SSM029, SSM095, SSM047, SSM069, SSM021, SSM037, SSM034, SSM087, SSM046, SSM019, SSM096, SSM068, SSM044, SSM074, SSM015, SSM098, SSM018, SSM076, SSM058, SSM070, SSM080
Known GenesTP63
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Pubmed ID23290073
Accession Number(s)esv2726368
Sample Size96
Observed Gain0
Observed Loss53
Observed Complex0

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