A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2725350



Internal ID9959655
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr3:64013619..64018762hg38UCSC Ensembl
Outerchr3:63999295..64004438hg19UCSC Ensembl
Cytoband3p14.1
Allele length
AssemblyAllele length
hg385144
hg195144
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6951138
SamplesSSM025
Known GenesPSMD6
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2725350
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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