A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2725173



Internal ID10308809
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr3:38877624..38877723hg38UCSC Ensembl
Outerchr3:38919115..38919214hg19UCSC Ensembl
Cytoband3p22.2
Allele length
AssemblyAllele length
hg38100
hg19100
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6817223, essv6854070
SamplesSSM087, SSM078
Known GenesSCN11A
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2725173
Frequency
Sample Size96
Observed Gain0
Observed Loss2
Observed Complex0
Frequencyn/a


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