A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2724924



Internal ID9959226
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr3:11905823..11908292hg38UCSC Ensembl
Outerchr3:11947297..11949766hg19UCSC Ensembl
Cytoband3p25.2
Allele length
AssemblyAllele length
hg382470
hg192470
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6726351, essv6825547, essv6892774, essv6810696, essv6759432, essv6762147, essv6714751, essv6844314, essv6883629, essv6718644, essv6789697, essv6872111, essv6864611, essv6722493, essv6962398, essv6875103, essv6914416, essv6704291, essv6698899, essv6859817, essv6917967, essv6933858, essv6886354, essv6836669, essv6793838, essv6669808
SamplesSSM083, SSM071, SSM027, SSM045, SSM046, SSM088, SSM092, SSM021, SSM061, SSM096, SSM062, SSM089, SSM017, SSM031, SSM044, SSM006, SSM085, SSM040, SSM016, SSM080, SSM076, SSM091, SSM070, SSM095, SSM043, SSM098
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2724924
Frequency
Sample Size96
Observed Gain0
Observed Loss26
Observed Complex0
Frequencyn/a


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