A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2724923



Internal ID9959225
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr3:11905062..11906986hg38UCSC Ensembl
Outerchr3:11946536..11948460hg19UCSC Ensembl
Cytoband3p25.2
Allele length
AssemblyAllele length
hg381925
hg191925
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6926124, essv6831597, essv6921195, essv6722698, essv6929639, essv6847848, essv6820387, essv6973341, essv6875102, essv6881298
SamplesSSM002, SSM092, SSM029, SSM019, SSM003, SSM086, SSM020, SSM007, SSM010, SSM012
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2724923
Frequency
Sample Size96
Observed Gain0
Observed Loss10
Observed Complex0
Frequencyn/a


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