A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2724915



Internal ID9959217
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr3:11604976..11605278hg38UCSC Ensembl
Outerchr3:11646450..11646752hg19UCSC Ensembl
Cytoband3p25.3
Allele length
AssemblyAllele length
hg38303
hg19303
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6813612, essv6955644, essv6926123, essv6973338, essv6880793
SamplesSSM029, SSM026, SSM019, SSM094, SSM077
Known GenesVGLL4
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2724915
Frequency
Sample Size96
Observed Gain0
Observed Loss5
Observed Complex0
Frequencyn/a


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