Variant DetailsVariant: esv2724895![](http://dgv.tcag.ca/gb2/gbrowse_img/dgv2_hg38/?name=chr3:10064005..11886857;width=800;overview=1) Internal ID | 9959197 | Landmark | | Location Information | | Cytoband | 3p25.2 | Allele length | Assembly | Allele length | hg38 | 1822853 | hg19 | 1822643 |
| Variant Type | CNV deletion | Copy Number | | Allele State | | Allele Origin | | Probe Count | | Validation Flag | | Merged Status | M | Merged Variants | dgv762e201 | Supporting Variants | essv6962394, essv6781427, essv6896202, essv6829477, essv6833056, essv6789695, essv6813612, essv6711089, essv6892771, essv6821675, essv6745312, essv6707706, essv6951094, essv6938192, essv6886353, essv6788855, essv6954417, essv6714748, essv6730101, essv6847845, essv6854028, essv6804815, essv6798008, essv6777451, essv6859814, essv6813608, essv6840481, essv6700184, essv6748161, essv6906652, essv6726350, essv6679670, essv6785564, essv6817191, essv6954428, essv6722490, essv6938191, essv6954406, essv6667150, essv6921173, essv6906653, essv6880792, essv6817190, essv6955642, essv6726348, essv6899022, essv6730104, essv6833058, essv6921162, essv6926121, essv6836668, essv6739283, essv6899023, essv6903006, essv6848387, essv6785563, essv6753907, essv6892772, essv6807783, essv6962393, essv6770058, essv6955641, essv6947021, essv6864610, essv6718642, essv6955644, essv6718641, essv6875101, essv6711086, essv6813609, essv6859815, essv6859810, essv6793837, essv6781428, essv6942401, essv6847847, essv6825544, essv6968512, essv6914415, essv6810695, essv6933857, essv6962391, essv6881287, essv6745313, essv6777450, essv6859808, essv6859813, essv6733818, essv6689725, essv6864607, essv6793835, essv6753287, essv6714749, essv6926123, essv6700183, essv6753298, essv6880790, essv6889463, essv6726349, essv6847844, essv6864606, essv6726352, essv6798005, essv6693355, essv6910579, essv6877486, essv6707707, essv6789696, essv6942400, essv6820376, essv6693356, essv6667149, essv6770059, essv6697358, essv6973335, essv6745315, essv6726354, essv6962392, essv6686567, essv6825545, essv6711087, essv6869101, essv6917966, essv6880791, essv6798006, essv6968510, essv6929638, essv6829479, essv6955643, essv6820364, essv6889462, essv6689726, essv6889464, essv6878028, essv6793836, essv6922282, essv6722492, essv6829478, essv6813611, essv6722489, essv6753909, essv6742533, essv6886351, essv6878029, essv6669807, essv6922280, essv6722491, essv6711090, essv6745314, essv6736380, essv6968509, essv6942402, essv6922281, essv6973338, essv6973337, essv6968511, essv6864608, essv6730102, essv6926122, essv6773927, essv6683268, essv6875100, essv6910580, essv6669804, essv6951093, essv6693353, essv6675706, essv6906650, essv6859812, essv6793834, essv6973336, essv6951092, essv6801994, essv6798007, essv6714747, essv6698888, essv6753309, essv6933856, essv6921184, essv6844313, essv6804814, essv6847846, essv6739282, essv6730103, essv6947020, essv6880793, essv6669805, essv6854031, essv6942399, essv6683267, essv6781429, essv6962397, essv6669806, essv6859811, essv6773926, essv6801995, essv6669803, essv6854029, essv6833057 | Samples | SSM100, SSM036, SSM008, SSM083, SSM071, SSM027, SSM024, SSM075, SSM045, SSM046, SSM011, SSM079, SSM065, SSM087, SSM038, SSM097, SSM039, SSM013, SSM009, SSM073, SSM093, SSM050, SSM074, SSM042, SSM088, SSM041, SSM023, SSM058, SSM028, SSM092, SSM084, SSM090, SSM021, SSM047, SSM018, SSM069, SSM029, SSM096, SSM026, SSM089, SSM017, SSM019, SSM035, SSM094, SSM032, SSM003, SSM031, SSM067, SSM044, SSM001, SSM014, SSM086, SSM033, SSM066, SSM006, SSM085, SSM068, SSM081, SSM072, SSM082, SSM020, SSM015, SSM078, SSM016, SSM053, SSM080, SSM037, SSM077, SSM076, SSM022, SSM010, SSM055, SSM070, SSM025, SSM034, SSM004, SSM099, SSM043, SSM052, SSM098, SSM049, SSM056, SSM030, SSM012 | Known Genes | ATG7, ATP2B2, BRK1, FANCD2, FANCD2OS, GHRL, GHRLOS, HRH1, IRAK2, LINC00606, LINC00852, MIR885, SEC13, SLC6A1, SLC6A11, SLC6A1-AS1, TAMM41, TATDN2, VGLL4, VHL | Method | Sequencing | Analysis | Breakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads | Platform | Illumina HiSeq 2000 | Comments | | Reference | Wong_et_al_2012b | Pubmed ID | 23290073 | Accession Number(s) | esv2724895
| Frequency | Sample Size | 96 | Observed Gain | 0 | Observed Loss | 84 | Observed Complex | 0 | Frequency | n/a |
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