A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2724795



Internal ID9959097
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr3:2287617..2287781hg38UCSC Ensembl
Outerchr3:2329301..2329465hg19UCSC Ensembl
Cytoband3p26.3
Allele length
AssemblyAllele length
hg38165
hg19165
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6840467
SamplesSSM084
Known GenesCNTN4
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2724795
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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