A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2724531



Internal ID10308167
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr22:48336780..48337840hg38UCSC Ensembl
Outerchr22:48732592..48733652hg19UCSC Ensembl
Cytoband22q13.32
Allele length
AssemblyAllele length
hg381061
hg191061
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6950365, essv6738717, essv6773286, essv6707147, essv6761762, essv6863779, essv6788961, essv6784795, essv6714089, essv6675006, essv6842886, essv6913835, essv6925535, essv6921559, essv6877577, essv6756440, essv6961237, essv6807257, essv6780683, essv6797272, essv6776784, essv6902380, essv6668166, essv6718014, essv6937498, essv6885867, essv6783232, essv6901491, essv6928922, essv6967682, essv6815809, essv6946305, essv6933122, essv6793115, essv6729458, essv6839811
SamplesSSM100, SSM008, SSM083, SSM071, SSM027, SSM024, SSM046, SSM065, SSM009, SSM050, SSM074, SSM042, SSM088, SSM023, SSM058, SSM092, SSM021, SSM018, SSM069, SSM061, SSM026, SSM017, SSM019, SSM031, SSM067, SSM066, SSM068, SSM040, SSM020, SSM015, SSM010, SSM070, SSM095, SSM004, SSM043, SSM012
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2724531
Frequency
Sample Size96
Observed Gain0
Observed Loss36
Observed Complex0
Frequencyn/a


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